Using historical thinking for analyzing the teaching and learning of secondary school history, this paper contributes to literature and debates on the pedagogical potential of museums in this endeavor. Despite the existence of museums and expansive literature on their historical significance in various world settings, there has not been much effort to connect history teaching and learning to this institution. Drawing our arguments from literature on historical thinking and museum studies, we explore the value of museums in the teaching and learning of secondary school history. We commend the inherent value in museums if their educational programs are packaged effectively for this purpose. Apart from connecting learners to cognitive activities as well as fostering an understanding and application of its disciplinary competencies, museums also engage with elements of historical thinking. Disciplinary competencies of history include critical thinking, extrapolation, evaluation of sources and detection of bias. Elements of historical thinking which makes museums stand out as potentially significant in secondary school pedagogy are empathy, historical significance, primary source evidence, cause and consequence and continuity and change. However, despite their esteemed pedagogical value, operationalizing teaching and learning of history using various museums facilities comes with several challenges which include high cost of organizing lessons, a strain on the school timetable, complexities associated with logistical and legal demands of out of school visits. Nonetheless, several innovations can be used to deal with such challenges.