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Goodsell, David S.; Zardecki, Christine; Berman, Helen M.; Burley, Stephen K. – Biochemistry and Molecular Biology Education, 2020
For 20 years, Molecule of the Month articles have highlighted the functional stories of 3D structures found in the Protein Data Bank (PDB). The PDB is the primary archive of atomic structures of biological molecules, currently providing open access to more than 150,000 structures studied by researchers around the world. The wealth of knowledge…
Descriptors: Biochemistry, Molecular Structure, Archives, Genetics
Span, Elise A.; Goodsell, David S.; Ramchandran, Ramani; Franzen, Margaret A.; Herman, Tim; Sem, Daniel S. – Biochemistry and Molecular Biology Education, 2013
A team of students, educators, and researchers has developed new materials to teach cell signaling within its cellular context. Two nontraditional modalities are employed: physical models, to explore the atomic details of several of the proteins in the angiogenesis signaling cascade, and illustrations of the proteins in their cellular environment,…
Descriptors: Science Instruction, Molecular Biology, Teaching Methods, Models
Goodsell, David S. – Biochemistry and Molecular Biology Education, 2011
Diverse biological data may be used to create illustrations of molecules in their cellular context. This report describes the scientific results that support an illustration of a eukaryotic cell, enlarged by one million times to show the distribution and arrangement of macromolecules. The panoramic cross section includes eight panels that extend…
Descriptors: Biochemistry, Molecular Structure, Science Instruction, Spectroscopy
Goodsell, David S. – Biochemistry and Molecular Biology Education, 2010
Diverse biological data may be used to create illustrations of molecules in their cellular context. I describe the scientific results that support a recent textbook illustration of a mitochondrion. The image magnifies a portion of the mitochondrion by one million times, showing the location and form of membranes and individual macromolecules,…
Descriptors: Molecular Biology, Biology, Biochemistry, Science Instruction
Goodsell, David S. – Biochemistry and Molecular Biology Education, 2009
Diverse biological data may be used to create illustrations of molecules in their cellular context. I describe the scientific results that support a recent textbook illustration of an "Escherichia coli cell". The image magnifies a portion of the bacterium at one million times, showing the location and form of individual macromolecules. Results…
Descriptors: Biology, Biochemistry, Molecular Structure, Science Instruction
Herman, Tim; Morris, Jennifer; Colton, Shannon; Batiza, Ann; Patrick, Michael; Franzen, Margaret; Goodsell, David S. – Biochemistry and Molecular Biology Education, 2006
The technology now exists to construct physical models of proteins based on atomic coordinates of solved structures. We review here our recent experiences in using physical models to teach concepts of protein structure and function at both the high school and the undergraduate levels. At the high school level, physical models are used in a…
Descriptors: Science Instruction, Secondary School Science, College Science, Molecular Biology